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Molecular Evolution Glossary

SLiMSuite: Short Linear Motif discovery and molecular evolution toolkit

EdwardsLab Servers

The EdwardsLab servers are currently under development. Please see the SLiMSuite Blog and REST server news page for more information and updates.

SLiMSuite-REST

RShiny

Bioware

SLiMSUite

Software

REST Servers RShiny Servers Bioware@UCD SLiMSuite Blog Software

Server front-ends:

Web forms to run the REST servers are currently available for the following tools:

  • SLiMProb - short linear motif prediction and probability of occurrence.
  • SLiMFinder - de novo SLiM prediction from protein sequences.
  • QSLiMFinder - Query-focused de novo SLiM prediction from protein sequences.
  • SLiMMaker - generate Regex SLiMs from peptide sequences.
  • SMRTSCAPE - predicted genome coverage from PacBio data.

RShiny Apps:

Details of the lab’s RShiny apps can be found on the RShiny Servers page. Or click below to go straight to the App:


Retrieve REST Server Job:

To retrieve an existing REST Server job, enter details below and click Check/Receive. For more information on using the REST servers, click on the button below.

JobID: | Password (optional):


Run REST Server Job:

To run a job on a REST server, enter the program name and list of commandline options in the form &cmd1=val1&cmd2=val2 and click Submit to REST Server. Leave the Options and Password boxes blank to retrieve documentation.

Prog: | Options: | Password (optional):


© 2015 RJ Edwards. Contact: richard.edwards@unsw.edu.au.